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Multi-Regional Analysis of Contact Maps for Protein Structure Prediction
1D protein sequences, 2D contact maps and 3D structures are three different representational levels of detail for proteins. Predicting protein 3D structures from their 1D sequences remains one of the complex challenges ...
Pattern Discovery in Protein Structures and Interaction Networks
Pattern discovery in protein structures is a fundamental task in computational biology, with important applications in protein structure prediction, profiling and alignment. We propose a novel approach for pattern discovery ...